Im not sure about modifying the actual files, but it may be as simple as using a hex editor if you can find the values for what you want to modify (probably not that simple tbh)...
but if you can find the files for the figures and modify them, then you could easily get NTAG 215 tags and write the modified files to them with something like "TagMo" for android and use them as the actual figures, but modified.
hope this helps! I used to write amiibo's to them all the time.